Background: Primary isolates of HIV and SIV
are highly resistant to antibody-mediated neutralization. We used SIV239, a
molecularly cloned pathogenic SIV, to investigate the factors that determine
the neutralization-resistant phenotype.
Methods: We studied a collection of
genetically altered derivatives of the neutralization-resistant SIV239. The
variant strains differed from SIV239 only at defined sites in env. These included variants lacking
multiple N-glycans, a variant bearing a 100 a.a. deletion of the V1-V2 loops
(SIVDV1V2), and SIVmac316, which bears
8 amino acid substitutions that confer increased replicative capacity for
macrophages. We used 57 anti-env monoclonal antibodies, which represented a
minimum of 9 distinct competition groups in gp120, to determine the degree to
which each genetic modification influenced neutralization-sensitivity. A subset
of these MAbs was tested in a virion-capture assay to study binding of
neutralizing antibodies to native envelope spikes.
Results: None of the 57 MAbs efficiently
neutralized SIVmac239. Three (3) distinct genetic variants, SIVmac316, SIV-M5
(a quintuple N-glycan attachment site mutant) and SIVDV1V2 independently displayed global increases in
breadth and degree of neutralization-sensitivity. While the genetic alterations
in these 3 variants mapped largely to the N-terminal half of gp120, many of the
MAbs that neutralized the variant strains recognized epitopes in the C-terminal
half of gp120. Neutralization of these 3 strains was observed with MAbs from 8
of the 9 competition groups as well as an anti-gp41 MAb. Virion-capture assays
with 4 MAbs and 2 of the virus strains revealed a direct correlation of ability
to capture virions with ability to neutralize.
Conclusions: Of the 57 MAbs tested, none neutralized SIV239. However,
most of these neutralized multiple SIV239 variants, indicating that the epitope
sequences are intact in the SIV239 env
gene. Genetic alterations gave rise to global increases in sensitivity,
suggesting that resistance is not simply due to localized shielding of epitopes
by N-glycans or variable loops, but rather reflects some underlying physical
property of the fully assembled, native envelope complex. Results of
virion-capture binding assays suggest that the ability to neutralize correlates
directly with the ability to bind envelope spikes on the surface of virions.